3d Brain Atlas Reconstructor user guide

User guide

• Download and installation
• Description of the GUI for the reconstruction module
• Command-line reconstruction interface manual
• Supported file formats
• Interoperability with other atlasing software
• Troubleshooting

Common Atlas Format and its capabilities (work in progress...)

• Introduction
• Description of vector data processing - typical problems and their solutions
• Creation of new structures.
• Detailed description of the gap-filling algorithm