Welcome to the 3d Brain Atlas Reconstructor on-line service.

Welcome to the 3d Brain Atlas Reconstructor on-line service. Registration gives you access to the full functionality of the service which includes:

Downloading 3d Brain Atlas Reconstructor standalone

At the botthom of the page you will find link to the latest stable version of 3d Brain Atlas Reconstructor standalone. The developemntal version is available at Github. Installation details as well as user guide are available at the 3dBAR homepage (http://3dbar.org).

Performing customized reconstructions

Being registered also gives you the possibility of performing customized reconstruction of structures available in hosted datasets. Now, after loging in you will see Get Custom Reconstruction links. Click them to open the Custom Reconstruction Wizzard where you can determine what models you want to include in your reconstruction, choose the quality and the output format. Here you can find the detailed description of the wizzard.

Managing reconstructions you have performed

In the My reconstructions tab you will find list of all reconstructions which you carried out using your account. Your reconstructions can occupy the disk space up to a certain limits. The limits allows you to routinely use the service and, at the same time prevent, from exaggerated use of the mechanism, which could reduce the availability of the service for other users. If you feel you need more flexibility in storing and generating models - do not hesitate to let us know.

In the last bookmark you can check and correct the personal information entered during the registration process. You can also change your password or email address.

Download latest 3d Brain Atlas Reconstructor standalone.

If you use this software in published research we would appreciate referring to the article Common Atlas Format and 3D Brain Atlas Reconstructor, the infrastructure for constructing 3D brain atlases by Piotr Majka, Ewa Kublik, Grzegorz Furga, Daniel K. Wójcik (2012). By downloading the software you accept the terms of the license below.


3d Brain Atlas Reconstructor Copyright (C) 2010-2012 Piotr Majka, Jakub M. Dzik.

This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program. If not, see http://www.gnu.org/licenses/.

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