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Version 1 (modified by admin, 9 years ago) (diff)

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3d Brain Atlas Reconstructor

Software dedicated for automatic generation of models of 3D brain structures.

Project goals

  1. Creating software dedicated to automated reconstruction of 3D brain models. Key features:
    • Generating model of any combination of structures (ie. basing on structures hierarchy),
    • Arbitrary resolution of generated model (depends on source atlas quality only),
    • Exporting models in VRML format as polygonal mesh or volumetric data.
    • Modularity: One 3D model generation module, many wrappers for different input atlases.
  1. Support the software with:
    • Own data (ultimate goal),
    • Existing 2D atlases (as training sets).
  1. Creating special dataset format
    • Based on SVG format,
    • Adapted for handling representation of brain structures,
    • Supporting brain regions hierarchy,
    • Maximizing possibilities of atlasing systems interoperability.
  1. Ultimately, 3D Brain Atlas Reconstructor would be available as an open source project and on-line service with API.

3d Brain Atlas Reconstructor workflow

Attachments

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