= 3d Brain Atlas Reconstructor = ''Software dedicated to automatic generation of 3D models of brain structures.'' '''Don't know whare to go? Start here:''' '''[http://service.3dbar.org Browser-based interface]''' {{{#!th align=center width=350px == Standalone software == }}} {{{#!th align=center align=center width=350px == Web service == }}} || {{{#!td * [wiki:barSoftware3dbarTeaser Software overview] * '''[wiki:barSoftwareInstallation Download and installation]''' * '''[wiki:barSoftwareUserGuide User Guide]''' * [wiki:barSoftware3dbarExamples Sample reconstructions] }}} {{{#!td * '''[http://service.3dbar.org Browser-based interface]''' * [wiki:barServiceUserGuide Tutorials and howtos] * [wiki:barServiceServiceSyntax Full syntax of the services] }}} '' === Updates === Summary * September 2013: - New dataset available: the [http://www.3dbar.org:8080/getCafInfoPage?cafDatasetName=mbisc_11 Cortical structures from The Marmoset Brain in Stereotactic Coordinates atlas]. * January 2013: - The [http://www.3dbar.org/wiki/barServiceUserGuideAccesingRecWizzard Custom Reconstruction Wizard] now supports [http://en.wikipedia.org/wiki/STL_%28file_format%29 STL (STereoLithography)] file format * December 2012: - CAF dataset for [http://software.incf.org/software/waxholm-space/home The Waxholm Space], delineation 0.6.2 available, [http://www.3dbar.org:8080/getPreview?cafDatasetName=whs_0.6.2;structureName=CNS see the live preview], * September 2012: - Refined licensing information for a number of atlases. * August 2012: - New atlas available: [http://www.3dbar.org:8080/getCafInfoPage?cafDatasetName=aba2011 The Allen Mouse Brain Reference Atlas, 2011 Segmentation] * See the [wiki:barServiceUpdates full list of updates] {{{ #!html Please send feedback to Piotr Majka. }}} 3d Brain Atlas Reconstructor is created by [http://www.neuroinf.pl/Members/pmajka Piotr Majka], Jakub Kowalski in [http://www.neuroinf.pl/neuroinflab Laboratory of Neuroinformatics] at [http://www.nencki.gov.pl/en Nencki Institute of Experimental Biology] under supervision of [http://www.neuroinf.pl/Members/danek Daniel Wójcik]. Project is supported by an infrastructural grant from the Polish Ministry of Regional Development POIG.02.03.00-00-003/09. {{{ #!html

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